LinearDesign Web Server(beta)
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Run LinearFold

Add a sequence

Paste or type RNA sequence here (length < 100,000):
1: tRNA_tdbR00000566-Homo_sapiens-9606-Tyr-9PA (len:76) 2: SRP_Oryz.sati._AC079888 (len:311) 3: 16S rRNA_A.pyrophilus (len:1564) 4: 23S rRNA_T.thermophilus (len:2915)

Or upload a file in FASTA format

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Available model(s) and parameter(s)


     


About LinearFold

Please cite the following paper:

* Liang Huang, **He Zhang, **Dezhong Deng, Kai Zhao, Kaibo Liu, David Hendrix, and David H. Mathews (2019). LinearFold: Linear-Time Approximate RNA Folding by 5’-to-3’ Dynamic Programming and Beam Search. Bioinformatics, Volume 35, Issue 14, July 2019, Pages i295–i304. ISMB 2019

*Corresponding Author, **Equal Contribution.

Code: github:LinearFold
Contact: RNA@baidu.com


Some Other RNA Secondary Structure Prediction Web Servers
RNAfold (Vienna)   RNAstructure (Rochester)   CONTRAfold (Stanford)   Mfold (Albany)   CentroidFold (JBIC)